TY - JOUR
T1 - Melanoma 2.0. Skin cancer as a paradigm for emerging diagnostic technologies, computational modelling and artificial intelligence
AU - Vera, Julio
AU - Lai, Xin
AU - Baur, Andreas
AU - Erdmann, Michael
AU - Gupta, Shailendra
AU - Guttà, Cristiano
AU - Heinzerling, Lucie
AU - Heppt, Markus V.
AU - Kazmierczak, Philipp Maximilian
AU - Kunz, Manfred
AU - Lischer, Christopher
AU - Pützer, Brigitte M.
AU - Rehm, Markus
AU - Ostalecki, Christian
AU - Retzlaff, Jimmy
AU - Witt, Stephan
AU - Wolkenhauer, Olaf
AU - Berking, Carola
N1 - Publisher Copyright:
© The Author(s) 2022. Published by Oxford University Press. All rights reserved.
PY - 2022/11/1
Y1 - 2022/11/1
N2 - We live in an unprecedented time in oncology. We have accumulated samples and cases in cohorts larger and more complex than ever before. New technologies are available for quantifying solid or liquid samples at the molecular level. At the same time, we are now equipped with the computational power necessary to handle this enormous amount of quantitative data. Computational models are widely used helping us to substantiate and interpret data. Under the label of systems and precision medicine, we are putting all these developments together to improve and personalize the therapy of cancer. In this review, we use melanoma as a paradigm to present the successful application of these technologies but also to discuss possible future developments in patient care linked to them. Melanoma is a paradigmatic case for disruptive improvements in therapies, with a considerable number of metastatic melanoma patients benefiting from novel therapies. Nevertheless, a large proportion of patients does not respond to therapy or suffers from adverse events. Melanoma is an ideal case study to deploy advanced technologies not only due to the medical need but also to some intrinsic features of melanoma as a disease and the skin as an organ. From the perspective of data acquisition, the skin is the ideal organ due to its accessibility and suitability for many kinds of advanced imaging techniques. We put special emphasis on the necessity of computational strategies to integrate multiple sources of quantitative data describing the tumour at different scales and levels.
AB - We live in an unprecedented time in oncology. We have accumulated samples and cases in cohorts larger and more complex than ever before. New technologies are available for quantifying solid or liquid samples at the molecular level. At the same time, we are now equipped with the computational power necessary to handle this enormous amount of quantitative data. Computational models are widely used helping us to substantiate and interpret data. Under the label of systems and precision medicine, we are putting all these developments together to improve and personalize the therapy of cancer. In this review, we use melanoma as a paradigm to present the successful application of these technologies but also to discuss possible future developments in patient care linked to them. Melanoma is a paradigmatic case for disruptive improvements in therapies, with a considerable number of metastatic melanoma patients benefiting from novel therapies. Nevertheless, a large proportion of patients does not respond to therapy or suffers from adverse events. Melanoma is an ideal case study to deploy advanced technologies not only due to the medical need but also to some intrinsic features of melanoma as a disease and the skin as an organ. From the perspective of data acquisition, the skin is the ideal organ due to its accessibility and suitability for many kinds of advanced imaging techniques. We put special emphasis on the necessity of computational strategies to integrate multiple sources of quantitative data describing the tumour at different scales and levels.
KW - liquid biopsies
KW - machine learning
KW - pharmacogenomics
KW - systems and network biology
KW - tumour imaging
KW - tumour sequencing
UR - https://www.scopus.com/pages/publications/85142403513
U2 - 10.1093/bib/bbac433
DO - 10.1093/bib/bbac433
M3 - Review article / Perspectives
C2 - 36252807
AN - SCOPUS:85142403513
SN - 1467-5463
VL - 23
JO - Briefings in Bioinformatics
JF - Briefings in Bioinformatics
IS - 6
M1 - bbac433
ER -