A hit map-based statistical method to predict best ligands for orphan olfactory receptors: Natural key odorants versus "lock Picks"

Dietmar Krautwurst, Matthias Kotthoff

Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

19 Scopus citations

Abstract

Smell is a multidimensional chemical sense. It creates a perception of our odorous environment by integrating the information of a plethora of volatile chemicals with other sensory inputs, emotions and memories. We are almost always exposed to odorant mixtures, not just single chemicals. Olfactory processing of complex odorant mixtures, such as coffee or wine, fi rst is decoded at the site of perception by the hundreds of different olfactory receptor types, each residing in the cilia of their olfactory sensory neurons in the nose. Often, only a few odorants from many are essential to determine complex olfactory perception. But merely using the chemical structure of odorants is insuf fi cient to identify and predict characteristic odor qualities and low odor thresholds. An understanding of odorant coding critically depends on knowledge about the interaction of key odorants of biologically relevant odor bouquets with their best cognate receptors. Here, we describe a hit map-based method of correlating the information content of all bioassay-tested odorants with their cognate odorant-receptor frequency in four phylogenetic subsets of human olfactory/chemosensory receptors.

Original languageEnglish
Title of host publicationProteomics for Biomarker Discovery
Subtitle of host publicationMethods and Protocols
PublisherHumana Press Inc.
Pages85-97
Number of pages13
ISBN (Print)9781627033763
DOIs
StatePublished - 2013

Publication series

NameMethods in Molecular Biology
Volume1003
ISSN (Print)1064-3745

Keywords

  • Body odorants
  • Chemosensory receptors
  • Cognate odorant-receptor frequency
  • Hit map
  • Key food odorants
  • Olfactory receptors
  • Phylogenetic dendrogram

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