The Helmholtz Network for Bioinformatics: An integrative web portal for bioinformatics resources

Torsten Crass; I. Antes; R. Basekow; P. Bork; C. Buning; M. Christensen; H. Claußen; C. Ebeling; P. Ernst; V. Gailus-Durner; K. H. Glatting; R. Gohla; F. Gößling; K. Grote; K. Heidtke; A. Hermann; S. O'Keeffe; O. Kießlich; S. Kolibal; J. O. Korbel; T. Lengauer; I. Liebich; M. van der Linden; H. Luz; K. Meissner; C. von Mering; H. T. Mevissen; H. W. Mewes; H. Michael; M. Mokrejs; T. Müller; H. Pospisil; M. Rarey; J. G. Reich; R. Schneider; D. Schomburg; S. Schulze-Kremer; K. Schwarzer; I. Sommer; S. Springstubbe; S. Suhai; G. Thoppae; M. Vingron; J. Warsfmann; T. Werner; D. Wetzler; E. Wingender; R. Zimmer

doi:10.1093/bioinformatics/btg398

The Helmholtz Network for Bioinformatics: An integrative web portal for bioinformatics resources

Torsten Crass^*
, I. Antes
, R. Basekow
, P. Bork
, C. Buning
, M. Christensen
, H. Claußen
, C. Ebeling
, P. Ernst
, V. Gailus-Durner
, K. H. Glatting
, R. Gohla
, F. Gößling
, K. Grote
, K. Heidtke
, A. Hermann
, S. O'Keeffe
, O. Kießlich
, S. Kolibal
, J. O. Korbel

T. Lengauer, I. Liebich, M. van der Linden, H. Luz, K. Meissner, C. von Mering, H. T. Mevissen, H. W. Mewes, H. Michael, M. Mokrejs, T. Müller, H. Pospisil, M. Rarey, J. G. Reich, R. Schneider, D. Schomburg, S. Schulze-Kremer, K. Schwarzer, I. Sommer, S. Springstubbe, S. Suhai, G. Thoppae, M. Vingron, J. Warsfmann, T. Werner, D. Wetzler, E. Wingender, R. Zimmer

^*Korrespondierende/r Autor/-in für diese Arbeit

Georg‑August‑Universität Göttingen
Max-Planck-Institut für Informatik
Genomforschung GmbH
Europäische Laboratorium für Molekularbiologie
Max-Delbrück-Centrum für Molekulare Medizin in der Helmholtz-Gemeinschaft
Fraunhofer-Institut für Algorithmen und Wissenschaftliches Rechnen SCAI
Universität zu Köln
Deutsches Krebsforschungszentrum
Helmholtz Zentrum München
Helmholtz-Zentrum für Infektionsforschung
Max-Planck-Institut für molekulare Genetik
Institut für Informatik, LMU
Ludwig-Maximilians-Universität München

Publikation: Beitrag in Fachzeitschrift › Artikel › Begutachtung

8 Zitate (Scopus)

Abstract

Summary: The Helmholtz Network for Bioinformatics (HNB) is a joint venture of eleven German bioinformatics research groups that offers convenient access to numerous bioinformatics resources through a single web portal. The 'Guided Solution Finder' which is available through the HNB portal helps users to locate the appropriate resources to answer their queries by employing a detailed, tree-like questionnaire. Furthermore, automated complex tool cascades ('tasks'), involving resources located on different servers, have been implemented, allowing users to perform comprehensive data analyses without the requirement of further manual intervention for data transfer and re-formatting. Currently, automated cascades for the analysis of regulatory DNA segments as well as for the prediction of protein functional properties are provided.

Originalsprache	Englisch
Seiten (von - bis)	268-270
Seitenumfang	3
Fachzeitschrift	Bioinformatics
Jahrgang	20
Ausgabenummer	2
DOIs	https://doi.org/10.1093/bioinformatics/btg398
Publikationsstatus	Veröffentlicht - 22 Jan. 2004
Extern publiziert	Ja

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10.1093/bioinformatics/btg398

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Crass, T., Antes, I., Basekow, R., Bork, P., Buning, C., Christensen, M., Claußen, H., Ebeling, C., Ernst, P., Gailus-Durner, V., Glatting, K. H., Gohla, R., Gößling, F., Grote, K., Heidtke, K., Hermann, A., O'Keeffe, S., Kießlich, O., Kolibal, S., ... Zimmer, R. (2004). The Helmholtz Network for Bioinformatics: An integrative web portal for bioinformatics resources. Bioinformatics, 20(2), 268-270. https://doi.org/10.1093/bioinformatics/btg398

@article{0f44d077357b44cab06186b42fdafb79,

title = "The Helmholtz Network for Bioinformatics: An integrative web portal for bioinformatics resources",

abstract = "Summary: The Helmholtz Network for Bioinformatics (HNB) is a joint venture of eleven German bioinformatics research groups that offers convenient access to numerous bioinformatics resources through a single web portal. The 'Guided Solution Finder' which is available through the HNB portal helps users to locate the appropriate resources to answer their queries by employing a detailed, tree-like questionnaire. Furthermore, automated complex tool cascades ('tasks'), involving resources located on different servers, have been implemented, allowing users to perform comprehensive data analyses without the requirement of further manual intervention for data transfer and re-formatting. Currently, automated cascades for the analysis of regulatory DNA segments as well as for the prediction of protein functional properties are provided.",

author = "Torsten Crass and I. Antes and R. Basekow and P. Bork and C. Buning and M. Christensen and H. Clau{\ss}en and C. Ebeling and P. Ernst and V. Gailus-Durner and Glatting, \{K. H.\} and R. Gohla and F. G{\"o}{\ss}ling and K. Grote and K. Heidtke and A. Hermann and S. O'Keeffe and O. Kie{\ss}lich and S. Kolibal and Korbel, \{J. O.\} and T. Lengauer and I. Liebich and \{van der Linden\}, M. and H. Luz and K. Meissner and \{von Mering\}, C. and Mevissen, \{H. T.\} and Mewes, \{H. W.\} and H. Michael and M. Mokrejs and T. M{\"u}ller and H. Pospisil and M. Rarey and Reich, \{J. G.\} and R. Schneider and D. Schomburg and S. Schulze-Kremer and K. Schwarzer and I. Sommer and S. Springstubbe and S. Suhai and G. Thoppae and M. Vingron and J. Warsfmann and T. Werner and D. Wetzler and E. Wingender and R. Zimmer",

year = "2004",

month = jan,

day = "22",

doi = "10.1093/bioinformatics/btg398",

language = "English",

volume = "20",

pages = "268--270",

journal = "Bioinformatics",

issn = "1367-4803",

number = "2",

}

Crass, T, Antes, I, Basekow, R, Bork, P, Buning, C, Christensen, M, Claußen, H, Ebeling, C, Ernst, P, Gailus-Durner, V, Glatting, KH, Gohla, R, Gößling, F, Grote, K, Heidtke, K, Hermann, A, O'Keeffe, S, Kießlich, O, Kolibal, S, Korbel, JO, Lengauer, T, Liebich, I, van der Linden, M, Luz, H, Meissner, K, von Mering, C, Mevissen, HT, Mewes, HW, Michael, H, Mokrejs, M, Müller, T, Pospisil, H, Rarey, M, Reich, JG, Schneider, R, Schomburg, D, Schulze-Kremer, S, Schwarzer, K, Sommer, I, Springstubbe, S, Suhai, S, Thoppae, G, Vingron, M, Warsfmann, J, Werner, T, Wetzler, D, Wingender, E & Zimmer, R 2004, 'The Helmholtz Network for Bioinformatics: An integrative web portal for bioinformatics resources', Bioinformatics, Jg. 20, Nr. 2, S. 268-270. https://doi.org/10.1093/bioinformatics/btg398

TY - JOUR

T1 - The Helmholtz Network for Bioinformatics

T2 - An integrative web portal for bioinformatics resources

AU - Crass, Torsten

AU - Antes, I.

AU - Basekow, R.

AU - Bork, P.

AU - Buning, C.

AU - Christensen, M.

AU - Claußen, H.

AU - Ebeling, C.

AU - Ernst, P.

AU - Gailus-Durner, V.

AU - Glatting, K. H.

AU - Gohla, R.

AU - Gößling, F.

AU - Grote, K.

AU - Heidtke, K.

AU - Hermann, A.

AU - O'Keeffe, S.

AU - Kießlich, O.

AU - Kolibal, S.

AU - Korbel, J. O.

AU - Lengauer, T.

AU - Liebich, I.

AU - van der Linden, M.

AU - Luz, H.

AU - Meissner, K.

AU - von Mering, C.

AU - Mevissen, H. T.

AU - Mewes, H. W.

AU - Michael, H.

AU - Mokrejs, M.

AU - Müller, T.

AU - Pospisil, H.

AU - Rarey, M.

AU - Reich, J. G.

AU - Schneider, R.

AU - Schomburg, D.

AU - Schulze-Kremer, S.

AU - Schwarzer, K.

AU - Sommer, I.

AU - Springstubbe, S.

AU - Suhai, S.

AU - Thoppae, G.

AU - Vingron, M.

AU - Warsfmann, J.

AU - Werner, T.

AU - Wetzler, D.

AU - Wingender, E.

AU - Zimmer, R.

PY - 2004/1/22

Y1 - 2004/1/22

N2 - Summary: The Helmholtz Network for Bioinformatics (HNB) is a joint venture of eleven German bioinformatics research groups that offers convenient access to numerous bioinformatics resources through a single web portal. The 'Guided Solution Finder' which is available through the HNB portal helps users to locate the appropriate resources to answer their queries by employing a detailed, tree-like questionnaire. Furthermore, automated complex tool cascades ('tasks'), involving resources located on different servers, have been implemented, allowing users to perform comprehensive data analyses without the requirement of further manual intervention for data transfer and re-formatting. Currently, automated cascades for the analysis of regulatory DNA segments as well as for the prediction of protein functional properties are provided.

AB - Summary: The Helmholtz Network for Bioinformatics (HNB) is a joint venture of eleven German bioinformatics research groups that offers convenient access to numerous bioinformatics resources through a single web portal. The 'Guided Solution Finder' which is available through the HNB portal helps users to locate the appropriate resources to answer their queries by employing a detailed, tree-like questionnaire. Furthermore, automated complex tool cascades ('tasks'), involving resources located on different servers, have been implemented, allowing users to perform comprehensive data analyses without the requirement of further manual intervention for data transfer and re-formatting. Currently, automated cascades for the analysis of regulatory DNA segments as well as for the prediction of protein functional properties are provided.

UR - https://www.scopus.com/pages/publications/10744222240

U2 - 10.1093/bioinformatics/btg398

DO - 10.1093/bioinformatics/btg398

M3 - Article

C2 - 14734319

AN - SCOPUS:10744222240

SN - 1367-4803

VL - 20

SP - 268

EP - 270

JO - Bioinformatics

JF - Bioinformatics

IS - 2

ER -

The Helmholtz Network for Bioinformatics: An integrative web portal for bioinformatics resources

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